ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jvnA3 - ECOD Domain | ECOD

ECOD/Domains/e5jvnA3

e5jvnA3

UID: 002055399

PDB

Range: A:0-378
PDB: 5JVN chain A(all domains)
UniProt: Q42736 (all domains)
Gene: PPDK

Molecule: Pyruvate, phosphate dikinase, chloroplastic

3D Structure

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Related Domains

Browse other domains in PPDK_N →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupATP-grasp(206.1.3)

FFamilyPPDK_N(206.1.3.3)

Ligands

in contact, ≤ 4 Å

2'-Bromo-2'-deoxyadenosine 5'-[beta,gamma-imide]triphosphoric acid6NQ

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Pyruvate phosphate dikinase, AMP/ATP-binding domain

ClanCL0179ATP-grasp

External Links

ECOD PDB View: 5JVN RCSB PDB: 5JVN PDBe: 5JVN UniProt: Q42736

Downloads

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