ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2fivB1 - ECOD Domain | ECOD

ECOD/Domains/e2fivB1

e2fivB1

UID: 000020554

PDB

Range: B:4-116
PDB: 2FIV chain B(all domains)
UniProt: P16088 (all domains)
Gene: pol

Molecule: FELINE IMMUNODEFICIENCY VIRUS PROTEASE

3D Structure

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Related Domains

Browse other domains in RVP →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilyRVP(1.1.1.3)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Retroviral aspartyl protease

ClanCL0129Peptidase_AA

External Links

ECOD PDB View: 2FIV RCSB PDB: 2FIV PDBe: 2FIV UniProt: P16088

Downloads

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