ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ldsC4 - ECOD Domain | ECOD

ECOD/Domains/e5ldsC4

e5ldsC4

UID: 002055458

PDB

Range: C:634-963
PDB: 5LDS chain C(all domains)
UniProt: P15145 (all domains)
Gene: ANPEP

Molecule: Aminopeptidase N

3D Structure

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Related Domains

Browse other domains in ERAP1_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyERAP1_C(109.4.1.158)

Ligands

in contact, ≤ 4 Å

2-acetamido-2-deoxy-beta-D-glucopyranoseNAG

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF11838ERAP1_C

ERAP1-like C-terminal domain

ClanCL0159E-set

External Links

ECOD PDB View: 5LDS RCSB PDB: 5LDS PDBe: 5LDS UniProt: P15145

Downloads

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