ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5v0tA1 - ECOD Domain | ECOD

ECOD/Domains/e5v0tA1

e5v0tA1

UID: 002056061

PDB

Range: A:239-467
PDB: 5V0T chain A(all domains)
UniProt: Q13W28 (all domains)
Gene: Bxe_A1242

Molecule: Alpha,alpha-trehalose-phosphate synthase (UDP-forming)

3D Structure

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Related Domains

Browse other domains in Glyco_transf_20 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512)

HH-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1)

TT-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1.1)

FFamilyGlyco_transf_20(7512.1.1.6)

Ligands

in contact, ≤ 4 Å

alpha-D-glucose 6-phosphateG6P
drugDrugBank DB02007
Oxalic AcidOXD
drugDrugBank DB03902

Pfam Families

PF00982Glyco_transf_20

Glycosyltransferase family 20

ClanCL0113GT-B

External Links

ECOD PDB View: 5V0T RCSB PDB: 5V0T PDBe: 5V0T UniProt: Q13W28

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Uridine-5'-Diphosphate

drugDrugBank DB03435

+ 3 additives (Acetate, Formic acid, 1,2-ETHANEDIOL)

AcetateACT
DrugBank DB14511
Formic acidFMT
DrugBank DB01942
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.