ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5x40A1 - ECOD Domain | ECOD

ECOD/Domains/e5x40A1

e5x40A1

UID: 002057242

PDB

Range: A:1-280
PDB: 5X40 chain A(all domains)
UniProt: O68106 (all domains)
Gene: cbiO

Molecule: Cobalt ABC transporter ATP-binding protein

3D Structure

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Related Domains

Browse other domains in ABC_tran, AAA_21 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyABC_tran, AAA_21(2004.1.1.417)

Ligands

in contact, ≤ 4 Å

Adenosine-5'-[Beta, Gamma-Methylene]TriphosphateACP
drugDrugBank DB03909
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00005ABC_tran

ABC transporter

ClanCL0023P-loop_NTPase

AAA domain, putative AbiEii toxin, Type IV TA system

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5X40 RCSB PDB: 5X40 PDBe: 5X40 UniProt: O68106

Downloads

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