ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ls3A1 - ECOD Domain | ECOD

ECOD/Domains/e4ls3A1

e4ls3A1

UID: 002059429

PDB

Range: A:176-334
PDB: 4LS3 chain A(all domains)
UniProt: B5Z9J2 (all domains)
Gene: HPG27_1499

Molecule: Nickel (III) ABC transporter, periplasmic iron-bindin gprotein

3D Structure

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Related Domains

Browse other domains in Peripla_BP_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupChelatase-like(2007.1.14)

FFamilyPeripla_BP_2(2007.1.14.5)

Ligands

in contact, ≤ 4 Å

HistidineHIS
drugDrugBank DB00117
NICKEL (II) IONNI
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01497Peripla_BP_2

Periplasmic binding protein

ClanCL0043Chelatase

External Links

ECOD PDB View: 4LS3 RCSB PDB: 4LS3 PDBe: 4LS3 UniProt: B5Z9J2

Downloads

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