ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vlbB2 - ECOD Domain | ECOD

ECOD/Domains/e2vlbB2

e2vlbB2

UID: 002059707

PDB

Range: B:6-116
PDB: 2VLB chain B(all domains)
UniProt: Q05115 (all domains)

Molecule: ARYLMALONATE DECARBOXYLASE

3D Structure

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Related Domains

Browse other domains in Amdase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupATC-like(2007.1.5)

FFamilyAmdase(2007.1.5.3)

Ligands

in contact, ≤ 4 Å

MercaptoethanolBME
drugDrugBank DB03345

+ 2 additives (Phosphate ion, 1,2-ETHANEDIOL)

Phosphate ionPO4
DrugBank DB14523

Pfam Families

Arylmalonate decarboxylase

ClanCL0399Asp-glut_race

External Links

ECOD PDB View: 2VLB RCSB PDB: 2VLB PDBe: 2VLB UniProt: Q05115

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.