ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5m0rE3 - ECOD Domain | ECOD

ECOD/Domains/e5m0rE3

e5m0rE3

UID: 002060216

PDB

Range: E:223-272
PDB: 5M0R chain E(all domains)
UniProt: P35956 (all domains)
Gene: pol

Molecule: integrase

3D Structure

Loading viewer...

Related Domains

Browse other domains in IN_DBD_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyIN_DBD_C(4.1.1.8)

Pfam Families

PF00552IN_DBD_C

Integrase DNA binding domain

ClanCL0010SH3

External Links

ECOD PDB View: 5M0R RCSB PDB: 5M0R PDBe: 5M0R UniProt: P35956

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure