ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5mjkD1 - ECOD Domain | ECOD

ECOD/Domains/e5mjkD1

e5mjkD1

UID: 002060962

PDB

Range: D:115-236
PDB: 5MJK chain D(all domains)
UniProt: A2RLJ5 (all domains)
Gene: trxB1

Molecule: Thioredoxin reductase

3D Structure

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Related Domains

Browse other domains in Pyr_redox →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyPyr_redox(2003.1.2.1)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF00070Pyr_redox

Pyridine nucleotide-disulphide oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5MJK RCSB PDB: 5MJK PDBe: 5MJK UniProt: A2RLJ5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.