ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5mjkD2 - ECOD Domain | ECOD

ECOD/Domains/e5mjkD2

e5mjkD2

UID: 002060963

PDB

Range: D:5-114,D:237-306
PDB: 5MJK chain D(all domains)
UniProt: A2RLJ5 (all domains)
Gene: trxB1

Molecule: Thioredoxin reductase

3D Structure

Loading viewer...

Related Domains

Browse other domains in Pyr_redox_2+FAD_oxidored →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyPyr_redox_2+FAD_oxidored(2003.1.2.53)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07992Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

ClanCL0063NADP_Rossmann

PF12831FAD_oxidored

FAD dependent oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5MJK RCSB PDB: 5MJK PDBe: 5MJK UniProt: A2RLJ5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure