ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5wq3A1 - ECOD Domain | ECOD

ECOD/Domains/e5wq3A1

e5wq3A1

UID: 002061494

PDB

Range: A:42-249
PDB: 5WQ3 chain A(all domains)
UniProt: Q8NRE2 (all domains)
Gene: Cgl1110

Molecule: Cytokinin riboside 5'-monophosphate phosphoribohydrolase

3D Structure

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Related Domains

Browse other domains in Lysine_decarbox →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMCP/YpsA-related(7563)

HH-groupMCP/YpsA-related(7563.1)

TT-groupMCP/YpsA-related(7563.1.1)

FFamilyLysine_decarbox(7563.1.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Glycerin, Phosphate ion, Pentaethylene glycol)

GlycerinGOL
DrugBank DB09462
Phosphate ionPO4
DrugBank DB14523
Pentaethylene glycol

Pfam Families

PF03641Lysine_decarbox

Possible lysine decarboxylase

ClanCL0349SLOG

External Links

ECOD PDB View: 5WQ3 RCSB PDB: 5WQ3 PDBe: 5WQ3 UniProt: Q8NRE2

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.