ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5x30C1 - ECOD Domain | ECOD

ECOD/Domains/e5x30C1

e5x30C1

UID: 002061554

PDB

Range: C:6-262
PDB: 5X30 chain C(all domains)
UniProt: P13254 (all domains)
Gene: mdeA

Molecule: L-methionine gamma-lyase

3D Structure

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Related Domains

Browse other domains in Cys_Met_Meta_PP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyCys_Met_Meta_PP(7577.1.1.7)

Ligands

in contact, ≤ 4 Å

HomocysteineHCS
drugDrugBank DB04422
(2~{S})-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]-4-sulfanyl-butanoic acid7XF

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01053Cys_Met_Meta_PP

Cys/Met metabolism PLP-dependent enzyme

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 5X30 RCSB PDB: 5X30 PDBe: 5X30 UniProt: P13254

Downloads

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