ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ps9A2 - ECOD Domain | ECOD

ECOD/Domains/e3ps9A2

e3ps9A2

UID: 002062168

PDB

Range: A:264-663
PDB: 3PS9 chain A(all domains)
UniProt: C6ELC9 (all domains)

Molecule: tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNucleotide-binding domain(2003.1.3)

FFamilyDAO(2003.1.3.1)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

FAD dependent oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3PS9 RCSB PDB: 3PS9 PDBe: 3PS9 UniProt: C6ELC9

Downloads

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