ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3pvcA2 - ECOD Domain | ECOD

ECOD/Domains/e3pvcA2

e3pvcA2

UID: 002062171

PDB

Range: A:266-674
PDB: 3PVC chain A(all domains)
UniProt: Q8ZD36 (all domains)
Gene: mnmC

Molecule: tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC

3D Structure

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Related Domains

Browse other domains in DAO →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNucleotide-binding domain(2003.1.3)

FFamilyDAO(2003.1.3.1)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

FAD dependent oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3PVC RCSB PDB: 3PVC PDBe: 3PVC UniProt: Q8ZD36

Downloads

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