ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2xcfA1 - ECOD Domain | ECOD

ECOD/Domains/e2xcfA1

e2xcfA1

UID: 002062526

PDB

Range: A:1-180
PDB: 2XCF chain A(all domains)
UniProt: C1KHN2 (all domains)

Molecule: NS3 PROTEASE

3D Structure

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Related Domains

Browse other domains in Peptidase_S29 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyPeptidase_S29(1.1.5.14)

Ligands

in contact, ≤ 4 Å

CYCLOPENTYL N-[(2S)-1-[(2S,4R)-2-[[(4R)-8-HYDROXY-1,6,10-TRIOXA-5$L^{4}-BORASPIRO[4.5]DECAN-4-YL]CARBAMOYL]-4-ISOQUINOLIN-1-YLOXY-PYRROLIDIN-1-YL]-3,3-DIMETHYL-1-OXO-BUTAN-2-YL]CARBAMATEBBQ
Magnesium ionMG
metal
Zinc ion

Pfam Families

PF02907Peptidase_S29

Hepatitis C virus NS3 protease

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 2XCF RCSB PDB: 2XCF PDBe: 2XCF UniProt: C1KHN2

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.