ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hcaC1 - ECOD Domain | ECOD

ECOD/Domains/e5hcaC1

e5hcaC1

UID: 002062959

PDB

Range: C:14-189,C:291-360
PDB: 5HCA chain C(all domains)
UniProt: F2VN92 (all domains)

Molecule: Calreticulin,Calreticulin

3D Structure

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Related Domains

Browse other domains in Calreticulin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyCalreticulin(10.1.1.3)

Ligands

in contact, ≤ 4 Å

Beta-D-GlucoseBGC
drugDrugBank DB02379
Calcium ionCA
metal

+ 2 additives (Acetate, Sulfate ion)

Pfam Families

PF00262Calreticulin

Calreticulin family

ClanCL0004Concanavalin

External Links

ECOD PDB View: 5HCA RCSB PDB: 5HCA PDBe: 5HCA UniProt: F2VN92

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

AcetateACT

DrugBank DB14511

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.