ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5gjvA5 - ECOD Domain | ECOD

ECOD/Domains/e5gjvA5

e5gjvA5

UID: 002062970

PDB

Range: A:788-1078
PDB: 5GJV chain A(all domains)
UniProt: P07293 (all domains)
Gene: CACNA1S

Molecule: Voltage-dependent L-type calcium channel subunit alpha-1S

3D Structure

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Related Domains

Browse other domains in Ion_trans →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyIon_trans(5054.1.1.2)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINEPC1

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00520Ion_trans

Ion transport protein

ClanCL0030Ion_channel

External Links

ECOD PDB View: 5GJV RCSB PDB: 5GJV PDBe: 5GJV UniProt: P07293

Downloads

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