ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jonB4 - ECOD Domain | ECOD

ECOD/Domains/e5jonB4

e5jonB4

UID: 002063085

PDB

Range: B:-6-630
PDB: 5JON chain B(all domains)
UniProt: O88703 (all domains)
Gene: Hcn2

Molecule: Maltose-binding periplasmic protein,Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2

3D Structure

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Related Domains

Browse other domains in cNMP_binding →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilycNMP_binding(10.12.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Nitrate)

NitrateNO3
DrugBank DB14049

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00027cNMP_binding

Cyclic nucleotide-binding domain

ClanCL0029Cupin

External Links

ECOD PDB View: 5JON RCSB PDB: 5JON PDBe: 5JON UniProt: O88703

Downloads

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