ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5tibA2 - ECOD Domain | ECOD

ECOD/Domains/e5tibA2

e5tibA2

UID: 002063439

PDB

Range: A:1243-1406
PDB: 5TIB chain A(all domains)
UniProt: Q8TAX9 (all domains)
Gene: GSDMB

Molecule: Sugar ABC transporter substrate-binding protein,Gasdermin-B

3D Structure

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Related Domains

Browse other domains in Gasdermin_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupR3H domain-like(320)

HH-groupPUB domain(320.4)

TT-groupPUB domain(320.4.1)

FFamilyGasdermin_C(320.4.1.5)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF17708Gasdermin_C

Gasdermin PUB domain

External Links

ECOD PDB View: 5TIB RCSB PDB: 5TIB PDBe: 5TIB UniProt: Q8TAX9

Downloads

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