ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2ecjA1 - ECOD Domain | ECOD

ECOD/Domains/e2ecjA1

e2ecjA1

UID: 002066763

RepresentativePDB

Range: A:16-58
PDB: 2ECJ chain A(all domains)
UniProt: Q9HCM9 (all domains)
Gene: TRIM39

Molecule: Tripartite motif-containing protein 39

3D Structure

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Related Domains

Browse other domains in zf-C3HC4_4 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-C3HC4_4(376.1.1.29)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF15227zf-C3HC4_4

zinc finger of C3HC4-type, RING

ClanCL0229RING

External Links

ECOD PDB View: 2ECJ RCSB PDB: 2ECJ PDBe: 2ECJ UniProt: Q9HCM9

Downloads

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