ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5iftA3 - ECOD Domain | ECOD

ECOD/Domains/e5iftA3

e5iftA3

UID: 002067020

PDB

Range: A:41-393
PDB: 5IFT chain A(all domains)
UniProt: A2QAN3 (all domains)
Gene: lacA

Molecule: Probable beta-galactosidase A

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_35 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_35(2002.1.1.63)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01301Glyco_hydro_35

Glycosyl hydrolases family 35

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5IFT RCSB PDB: 5IFT PDBe: 5IFT UniProt: A2QAN3

Downloads

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