ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5v4rB1 - ECOD Domain | ECOD

ECOD/Domains/e5v4rB1

e5v4rB1

UID: 002067465

PDB

Range: B:796-946
PDB: 5V4R chain B(all domains)
UniProt: Q6PKG0 (all domains)
Gene: LARP1

Molecule: La-related protein 1

3D Structure

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Related Domains

Browse other domains in LARP1_HEAT →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyLARP1_HEAT(109.4.1.268)

Ligands

in contact, ≤ 4 Å

7-Methyl-7,8-dihydroguanosine 5'-(tetrahydrogen triphosphate)MGT
drugDrugBank DB03358

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF21071LARP1_HEAT

LARP1 HEAT repeat region

ClanCL0020TPR

External Links

ECOD PDB View: 5V4R RCSB PDB: 5V4R PDBe: 5V4R UniProt: Q6PKG0

Downloads

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