ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ts5B1 - ECOD Domain | ECOD

ECOD/Domains/e5ts5B1

e5ts5B1

UID: 002068021

PDB

Range: B:4-319,B:433-484
PDB: 5TS5 chain B(all domains)
UniProt: P0CC17 (all domains)

Molecule: Amine oxidase

3D Structure

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Related Domains

Browse other domains in Amino_oxidase →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupFAD-linked reductases-C(244.1)

TT-groupFAD-linked reductases-C(244.1.1)

FFamilyAmino_oxidase(244.1.1.6)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only

Pfam Families

PF01593Amino_oxidase

Flavin containing amine oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5TS5 RCSB PDB: 5TS5 PDBe: 5TS5 UniProt: P0CC17

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Zinc ionZN

metal

Shown in the structure viewer. Drug annotations from DrugDomain.