ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5u0lB2 - ECOD Domain | ECOD

ECOD/Domains/e5u0lB2

e5u0lB2

UID: 002068052

PDB

Range: B:251-461
PDB: 5U0L chain B(all domains)
UniProt: A1U5W8 (all domains)
Gene: astD

Molecule: N-succinylglutamate 5-semialdehyde dehydrogenase

3D Structure

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Related Domains

Browse other domains in Aldedh →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupALDH-like(7524)

HH-groupALDH-like(7524.1)

TT-groupALDH-like(7524.1.1)

FFamilyAldedh(7524.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives ((4r)-2-Methylpentane-2,4-Diol, 1,2-ETHANEDIOL)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Aldehyde dehydrogenase family

ClanCL0099ALDH-like

External Links

ECOD PDB View: 5U0L RCSB PDB: 5U0L PDBe: 5U0L UniProt: A1U5W8

Downloads

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