ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xdfB2 - ECOD Domain | ECOD

ECOD/Domains/e5xdfB2

e5xdfB2

UID: 002068376

PDB

Range: B:129-331
PDB: 5XDF chain B(all domains)
UniProt: Q5SL04 (all domains)
Gene: TTHA0489

Molecule: Homoserine dehydrogenase

3D Structure

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Related Domains

Browse other domains in Homoserine_dh →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFwdE/GAPDH domain-like(298)

HH-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1)

TT-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1.1)

FFamilyHomoserine_dh(298.1.1.2)

Ligands

in contact, ≤ 4 Å

L-HomoserineHSE
drugDrugBank DB04193
Sodium ionNA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00742Homoserine_dh

Homoserine dehydrogenase

ClanCL0139GADPH_aa-bio_dh

External Links

ECOD PDB View: 5XDF RCSB PDB: 5XDF PDBe: 5XDF UniProt: Q5SL04

Downloads

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