ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3tfjB3 - ECOD Domain | ECOD

ECOD/Domains/e3tfjB3

e3tfjB3

UID: 002068929

PDB

Range: B:1-149
PDB: 3TFJ chain B(all domains)
UniProt: Q4FP21 (all domains)
Gene: dmdA

Molecule: GcvT-like Aminomethyltransferase protein

3D Structure

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Related Domains

Browse other domains in GCV_T →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAminomethyltransferase folate-binding domain(304.107)

TT-groupAminomethyltransferase folate-binding domain(304.107.1)

FFamilyGCV_T(304.107.1.1)

Ligands

in contact, ≤ 4 Å

(6S)-5,6,7,8-tetrahydrofolic acidTHG
drugDrugBank DB02031
Sodium ionNA
metal

+ 2 additives (Acetate, Glycerin)

AcetateACT

Pfam Families

GCVT N-terminal domain

ClanCL0289FBD

External Links

ECOD PDB View: 3TFJ RCSB PDB: 3TFJ PDBe: 3TFJ UniProt: Q4FP21

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14511

GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.