ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hgrA1 - ECOD Domain | ECOD

ECOD/Domains/e5hgrA1

e5hgrA1

UID: 002069279

PDB

Range: A:3-175
PDB: 5HGR chain A(all domains)
UniProt: Q8YSD9 (all domains)

Molecule: Orange Carotenoid Protein (OCP)

3D Structure

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Related Domains

Browse other domains in Carot_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupOrange carotenoid protein, N-terminal domain(565)

HH-groupOrange carotenoid protein, N-terminal domain(565.1)

TT-groupOrange carotenoid protein, N-terminal domain(565.1.1)

FFamilyCarot_N(565.1.1.1)

Ligands

in contact, ≤ 4 Å

beta,beta-carotene-4,4'-dione45D

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF09150Carot_N

Orange carotenoid protein, N-terminal

External Links

ECOD PDB View: 5HGR RCSB PDB: 5HGR PDBe: 5HGR UniProt: Q8YSD9

Downloads

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