ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5tvmD1 - ECOD Domain | ECOD

ECOD/Domains/e5tvmD1

e5tvmD1

UID: 002069300

PDB

Range: D:86-209,D:232-356
PDB: 5TVM chain D(all domains)
UniProt: Q587A7 (all domains)
Gene: Tb06.26G9.820

Molecule: S-adenosylmethionine decarboxylase alpha chain

3D Structure

Loading viewer...

Related Domains

Browse other domains in SAM_decarbox →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTBP-like(331)

HH-groupS-adenosylmethionine decarboxylase-related(331.10)

TT-groupS-adenosylmethionine decarboxylase(331.10.1)

FFamilySAM_decarbox(331.10.1.1)

Ligands

in contact, ≤ 4 Å

2-[3-(2-Hydroxy-1,1-Dihydroxymethyl-Ethylamino)-Propylamino]-2-Hydroxymethyl-Propane-1,3-DiolB3P
drugDrugBank DB02676

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01536SAM_decarbox

Adenosylmethionine decarboxylase

External Links

ECOD PDB View: 5TVM RCSB PDB: 5TVM PDBe: 5TVM UniProt: Q587A7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure