ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5tl4D3 - ECOD Domain | ECOD

ECOD/Domains/e5tl4D3

e5tl4D3

UID: 002069442

PDB

Range: D:3-59,D:153-328
PDB: 5TL4 chain D(all domains)
UniProt: G2IQS7 (all domains)
Gene: ligM

Molecule: Vanillate/3-O-methylgallate O-demethylase

3D Structure

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Related Domains

Browse other domains in GCV_T →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAminomethyltransferase folate-binding domain(304.107)

TT-groupAminomethyltransferase folate-binding domain(304.107.1)

FFamilyGCV_T(304.107.1.1)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
Chloride ionCL
within 5 Å only

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

GCVT N-terminal domain

ClanCL0289FBD

External Links

ECOD PDB View: 5TL4 RCSB PDB: 5TL4 PDBe: 5TL4 UniProt: G2IQS7

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.