ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5nkkD1 - ECOD Domain | ECOD

ECOD/Domains/e5nkkD1

e5nkkD1

UID: 002069495

PDB

Range: D:59-284,D:307-364
PDB: 5NKK chain D(all domains)
UniProt: Q9XWJ1 (all domains)
Gene: smg-9

Molecule: Protein smg-9

3D Structure

Loading viewer...

Related Domains

Browse other domains in this classification →

Classification

AArchitecture—

XX-group—

HH-group—

TT-group—

FFamily—

Ligands

in contact, ≤ 4 Å

PYROPHOSPHATE 2-POP

Shown in the structure viewer. Drug annotations from DrugDomain.

External Links

ECOD PDB View: 5NKK RCSB PDB: 5NKK PDBe: 5NKK UniProt: Q9XWJ1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure