ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nkmD1 - ECOD Domain | ECOD

ECOD/Domains/e5nkmD1

e5nkmD1

UID: 002069496

PDB

Range: D:59-284,D:305-363
PDB: 5NKM chain D(all domains)
UniProt: Q9XWJ1 (all domains)
Gene: smg-9

Molecule: Protein smg-9

3D Structure

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Related Domains

Browse other domains in this classification →

Classification

AArchitecture—

XX-group—

HH-group—

TT-group—

FFamily—

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Tromethamine, 1,2-ETHANEDIOL)

TromethamineTRS
DrugBank DB03754
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

External Links

ECOD PDB View: 5NKM RCSB PDB: 5NKM PDBe: 5NKM UniProt: Q9XWJ1

Downloads

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