ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hkvR1 - ECOD Domain | ECOD

ECOD/Domains/e5hkvR1

e5hkvR1

UID: 002070977

PDB

Range: R:3-103
PDB: 5HKV chain R(all domains)
UniProt: Q2FW17 (all domains)
Gene: rplX

Molecule: 50S ribosomal protein L24

3D Structure

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Related Domains

Browse other domains in KOW,ribosomal_L24 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyKOW,ribosomal_L24(4.1.1.7)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
MANGANESE (II) IONMN
metal

+ 1 additive (Ethanol)

Ethanol

Pfam Families

KOW motif

ClanCL0010SH3

PF17136ribosomal_L24

Large ribosomal subunit protein uL24, C-terminal domain

ClanCL0010SH3

External Links

ECOD PDB View: 5HKV RCSB PDB: 5HKV PDBe: 5HKV UniProt: Q2FW17

Downloads

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DrugBank DB00898

Shown in the structure viewer. Drug annotations from DrugDomain.