ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5mg9A1 - ECOD Domain | ECOD

ECOD/Domains/e5mg9A1

e5mg9A1

UID: 002071161

PDB

Range: A:1-65
PDB: 5MG9 chain A(all domains)
UniProt: P85092 (all domains)

Molecule: AncTx1-W28R/I38S

3D Structure

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Related Domains

Browse other domains in Toxin_cobra-type →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupSnake toxin-like(382)

HH-groupSnake toxin-like(382.1)

TT-groupSnake toxin-like(382.1.1)

FFamilyToxin_cobra-type(382.1.1.7)

Ligands

in contact, ≤ 4 Å

(S)-propane-1,2-diolPGO
drugDrugBank DB04349
gamma-ValerolactoneYVR

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ion

Pfam Families

PF21947Toxin_cobra-type

Snake toxin cobra-type

ClanCL0117uPAR_Ly6_toxin

External Links

ECOD PDB View: 5MG9 RCSB PDB: 5MG9 PDBe: 5MG9 UniProt: P85092

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.