ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5twjD1 - ECOD Domain | ECOD

ECOD/Domains/e5twjD1

e5twjD1

UID: 002071350

PDB

Range: D:2-155
PDB: 5TWJ chain D(all domains)
UniProt: P0A8I8 (all domains)
Gene: rlmH

Molecule: Ribosomal RNA large subunit methyltransferase H

3D Structure

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Related Domains

Browse other domains in SPOUT_MTase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilySPOUT_MTase(2488.1.1.5)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02590SPOUT_MTase

Predicted SPOUT methyltransferase

ClanCL0098SPOUT

External Links

ECOD PDB View: 5TWJ RCSB PDB: 5TWJ PDBe: 5TWJ UniProt: P0A8I8

Downloads

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