ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5c6pA1 - ECOD Domain | ECOD

ECOD/Domains/e5c6pA1

e5c6pA1

UID: 002072332

PDB

Range: A:5-234
PDB: 5C6P chain A(all domains)
UniProt: Q5F9J8 (all domains)
Gene: NGO_0395

Molecule: protein C

3D Structure

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Related Domains

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Classification

AArchitecturealpha bundles(a.7)

XX-groupType II ABC exporter transmembrane domain fold(1075)

HH-groupMultidrug and toxic compound extrusion (MATE) transporter(1075.5)

TT-groupMultidrug and toxic compound extrusion (MATE) transporter(1075.5.1)

FFamilyMatE(1075.5.1.1)

Ligands

in contact, ≤ 4 Å

(2S)-2-(3,4-dimethoxyphenyl)-5-{[2-(3,4-dimethoxyphenyl)ethyl](methyl)amino}-2-(propan-2-yl)pentanenitrile4YH

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

MatE

ClanCL0222MviN_MATE

External Links

ECOD PDB View: 5C6P RCSB PDB: 5C6P PDBe: 5C6P UniProt: Q5F9J8

Downloads

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