ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4z3nA1 - ECOD Domain | ECOD

ECOD/Domains/e4z3nA1

e4z3nA1

UID: 002072359

PDB

Range: A:249-468
PDB: 4Z3N chain A(all domains)
UniProt: Q0P7K3 (all domains)
Gene: clbM

Molecule: Putative drug/sodium antiporter

3D Structure

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Related Domains

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Classification

AArchitecturealpha bundles(a.7)

XX-groupType II ABC exporter transmembrane domain fold(1075)

HH-groupMultidrug and toxic compound extrusion (MATE) transporter(1075.5)

TT-groupMultidrug and toxic compound extrusion (MATE) transporter(1075.5.1)

FFamilyMatE(1075.5.1.1)

Ligands

in contact, ≤ 4 Å

(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoateOLC

+ 1 additive (Cacodylate ion)

Cacodylate ionCAC

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

MatE

ClanCL0222MviN_MATE

External Links

ECOD PDB View: 4Z3N RCSB PDB: 4Z3N PDBe: 4Z3N UniProt: Q0P7K3

Downloads

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