ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5t77A1 - ECOD Domain | ECOD

ECOD/Domains/e5t77A1

e5t77A1

UID: 002072472

RepresentativePDB

Range: A:204-470
PDB: 5T77 chain A(all domains)
UniProt: B7IE18 (all domains)
Gene: murJ

Molecule: Putative lipid II flippase MurJ

3D Structure

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Related Domains

Browse other domains in MurJ, Polysacc_synt_3 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupType II ABC exporter transmembrane domain fold(1075)

HH-groupMultidrug and toxic compound extrusion (MATE) transporter(1075.5)

TT-groupMultidrug and toxic compound extrusion (MATE) transporter(1075.5.1)

FFamilyMurJ, Polysacc_synt_3(1075.5.1.12)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Chloride ionCL
Sodium ionNA
metal

Pfam Families

Lipid II flippase MurJ

ClanCL0222MviN_MATE

PF13440Polysacc_synt_3

Polysaccharide biosynthesis protein

ClanCL0222MviN_MATE

External Links

ECOD PDB View: 5T77 RCSB PDB: 5T77 PDBe: 5T77 UniProt: B7IE18

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoateOLB

(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoateOLC

Zinc ionZN

metal

+ 1 additive (Pentaethylene glycol)

Pentaethylene glycol1PE

Shown in the structure viewer. Drug annotations from DrugDomain.