ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2wddA1 - ECOD Domain | ECOD

ECOD/Domains/e2wddA1

e2wddA1

UID: 002072891

PDB

Range: A:31-113,A:365-573
PDB: 2WDD chain A(all domains)
UniProt: Q72IT0 (all domains)
Gene: soxB

Molecule: SULFUR OXIDATION PROTEIN SOXB

3D Structure

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Related Domains

Browse other domains in 5_nucleotid_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-group5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain(805)

HH-group5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain(805.1)

TT-group5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain(805.1.1)

FFamily5_nucleotid_C(805.1.1.1)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metal
Tertiary-butyl alcoholTBU

+ 2 additives (Acetate, Sulfate ion)

AcetateACT

Pfam Families

PF028725_nucleotid_C

5'-nucleotidase, C-terminal domain

ClanCL0781NadN_C

External Links

ECOD PDB View: 2WDD RCSB PDB: 2WDD PDBe: 2WDD UniProt: Q72IT0

Downloads

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DrugBank DB14511

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.