ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2wdfA1 - ECOD Domain | ECOD

ECOD/Domains/e2wdfA1

e2wdfA1

UID: 002072893

PDB

Range: A:30-113,A:365-573
PDB: 2WDF chain A(all domains)
UniProt: Q72IT0 (all domains)
Gene: soxB

Molecule: SULFUR OXIDATION PROTEIN SOXB

3D Structure

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Related Domains

Browse other domains in 5_nucleotid_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-group5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain(805)

HH-group5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain(805.1)

TT-group5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain(805.1.1)

FFamily5_nucleotid_C(805.1.1.1)

Ligands

in contact, ≤ 4 Å

tert-butanolTBU
drugDrugBank DB03900within 5 Å only
MANGANESE (II) IONMN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF028725_nucleotid_C

5'-nucleotidase, C-terminal domain

ClanCL0781NadN_C

External Links

ECOD PDB View: 2WDF RCSB PDB: 2WDF PDBe: 2WDF UniProt: Q72IT0

Downloads

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