ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3lduA1 - ECOD Domain | ECOD

ECOD/Domains/e3lduA1

e3lduA1

UID: 002073203

RepresentativePDB

Range: A:2-62
PDB: 3LDU chain A(all domains)
UniProt: Q186Y7 (all domains)
Gene: CD630_17800

Molecule: Putative methylase

3D Structure

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Related Domains

Browse other domains in RlmL_1st →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFerredoxin-like domain in ThiI(304.120)

TT-groupFerredoxin-like domain in ThiI(304.120.1)

FFamilyRlmL_1st(304.120.1.5)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Formic acid)

GlycerinGOL
DrugBank DB09462
Formic acidFMT

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF22020RlmL_1st

RlmL ferredoxin-like domain

External Links

ECOD PDB View: 3LDU RCSB PDB: 3LDU PDBe: 3LDU UniProt: Q186Y7

Downloads

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