ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3lduA3 - ECOD Domain | ECOD

ECOD/Domains/e3lduA3

e3lduA3

UID: 002073205

PDB

Range: A:173-380
PDB: 3LDU chain A(all domains)
UniProt: Q186Y7 (all domains)
Gene: CD630_17800

Molecule: Putative methylase

3D Structure

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Related Domains

Browse other domains in UPF0020 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyUPF0020(2003.1.5.5)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-TriphosphateGTP
drugDrugBank DB04137

+ 2 additives (Formic acid, Glycerol)

Formic acidFMT
DrugBank DB01942

Pfam Families

PF01170UPF0020

RMKL-like, methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3LDU RCSB PDB: 3LDU PDBe: 3LDU UniProt: Q186Y7

Downloads

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GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.