ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jawE2 - ECOD Domain | ECOD

ECOD/Domains/e5jawE2

e5jawE2

UID: 002073659

PDB

Range: E:416-575
PDB: 5JAW chain E(all domains)
UniProt: B3PBE0 (all domains)
Gene: bgl35A

Molecule: Beta-galactosidase, putative, bgl35A

3D Structure

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Related Domains

Browse other domains in DUF5597 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupGlycosyl hydrolase domain-like(12)

HH-groupGlycosyl hydrolase domain(12.1)

TT-groupGlycosyl hydrolase domain(12.1.1)

FFamilyDUF5597(12.1.1.38)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
(1S,2S,3S,4S,5R,6R)-5-amino-6-(hydroxymethyl)cyclohexane-1,2,3,4-tetrolUUU
within 5 Å only

+ 1 additive (Acetate)

AcetateACT

Pfam Families

PF18120DUF5597

Domain of unknown function (DUF5597)

ClanCL0369GHD

External Links

ECOD PDB View: 5JAW RCSB PDB: 5JAW PDBe: 5JAW UniProt: B3PBE0

Downloads

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DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.