ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5uqnA2 - ECOD Domain | ECOD

ECOD/Domains/e5uqnA2

e5uqnA2

UID: 002074044

PDB

Range: A:91-542
PDB: 5UQN chain A(all domains)
UniProt: P18177 (all domains)
Gene: tcdB

Molecule: Toxin B

3D Structure

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Related Domains

Browse other domains in TcdA_TcdB →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleotide-diphospho-sugar transferases(7516)

HH-groupNucleotide-diphospho-sugar transferases(7516.1)

TT-groupNucleotide-diphospho-sugar transferases(7516.1.1)

FFamilyTcdA_TcdB(7516.1.1.25)

Ligands

in contact, ≤ 4 Å

Uridine-5'-diphosphate-2-deoxy-2-fluoro-alpha-D-galactoseU2F
drugDrugBank DB03488
MANGANESE (II) IONMN
metal

+ 1 additive (Sulfate ion)

Pfam Families

PF12919TcdA_TcdB

TcdA/TcdB catalytic glycosyltransferase domain

ClanCL0110GT-A

External Links

ECOD PDB View: 5UQN RCSB PDB: 5UQN PDBe: 5UQN UniProt: P18177

Downloads

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Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.