ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5v5hA1 - ECOD Domain | ECOD

ECOD/Domains/e5v5hA1

e5v5hA1

UID: 002074086

PDB

Range: A:1-162
PDB: 5V5H chain A(all domains)
UniProt: Q6TQR6 (all domains)
Gene: L

Molecule: RNA-directed RNA polymerase L

3D Structure

Loading viewer...

Related Domains

Browse other domains in OTU →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyOTU(219.1.1.15)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
Zinc ionZN
metal

+ 1 additive (HEPES)

HEPESEPE

Pfam Families

OTU-like cysteine protease

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 5V5H RCSB PDB: 5V5H PDBe: 5V5H UniProt: Q6TQR6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB16872

Shown in the structure viewer. Drug annotations from DrugDomain.