ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vmtE1 - ECOD Domain | ECOD

ECOD/Domains/e5vmtE1

e5vmtE1

UID: 002074185

PDB

Range: E:151-314
PDB: 5VMT chain E(all domains)
UniProt: B4RPP8 (all domains)
Gene: NGK_2321

Molecule: Glyceraldehyde-3-phosphate dehydrogenase

3D Structure

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Related Domains

Browse other domains in Gp_dh_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFwdE/GAPDH domain-like(298)

HH-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1)

TT-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1.1)

FFamilyGp_dh_C(298.1.1.7)

Ligands

in contact, ≤ 4 Å

NadideNAD
drugDrugBank DB14128
Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02800Gp_dh_C

Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain

ClanCL0139GADPH_aa-bio_dh

External Links

ECOD PDB View: 5VMT RCSB PDB: 5VMT PDBe: 5VMT UniProt: B4RPP8

Downloads

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