ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vmtF1 - ECOD Domain | ECOD

ECOD/Domains/e5vmtF1

e5vmtF1

UID: 002074187

PDB

Range: F:1-150,F:315-333
PDB: 5VMT chain F(all domains)
UniProt: B4RPP8 (all domains)
Gene: NGK_2321

Molecule: Glyceraldehyde-3-phosphate dehydrogenase

3D Structure

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Related Domains

Browse other domains in Gp_dh_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyGp_dh_N(2003.1.1.1)

Ligands

in contact, ≤ 4 Å

NadideNAD
drugDrugBank DB14128

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00044Gp_dh_N

Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5VMT RCSB PDB: 5VMT PDBe: 5VMT UniProt: B4RPP8

Downloads

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