ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3h8sA3 - ECOD Domain | ECOD

ECOD/Domains/e3h8sA3

e3h8sA3

UID: 002074431

PDB

Range: A:11-180
PDB: 3H8S chain A(all domains)
UniProt: P13319 (all domains)
Gene: rnh

Molecule: Ribonuclease H

3D Structure

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Related Domains

Browse other domains in 5_3_exonuc_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupPIN domain-like(2006.1.4)

FFamily5_3_exonuc_N(2006.1.4.4)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF027395_3_exonuc_N

5'-3' exonuclease, N-terminal resolvase-like domain

ClanCL0280PIN

External Links

ECOD PDB View: 3H8S RCSB PDB: 3H8S PDBe: 3H8S UniProt: P13319

Downloads

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