ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3v8vA2 - ECOD Domain | ECOD

ECOD/Domains/e3v8vA2

e3v8vA2

UID: 002074653

PDB

Range: A:371-702
PDB: 3V8V chain A(all domains)
UniProt: P75864 (all domains)
Gene: rlmL

Molecule: Ribosomal RNA large subunit methyltransferase L

3D Structure

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Related Domains

Browse other domains in Methyltrans_SAM →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltrans_SAM(2003.1.5.74)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF10672Methyltrans_SAM

S-adenosylmethionine-dependent methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3V8V RCSB PDB: 3V8V PDBe: 3V8V UniProt: P75864

Downloads

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