ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2bdeA3 - ECOD Domain | ECOD

ECOD/Domains/e2bdeA3

e2bdeA3

UID: 002075056

RepresentativePDB

Range: A:2-31,A:185-459
PDB: 2BDE chain A(all domains)
UniProt: Q5ZZB6 (all domains)
Gene: lpg0095

Molecule: cytosolic IMP-GMP specific 5'-nucleotidase

3D Structure

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Related Domains

Browse other domains in 5_nucleotid →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupHAD-like(2006.1.1)

FFamily5_nucleotid(2006.1.1.8)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF057615_nucleotid

5' nucleotidase family

ClanCL0137HAD

External Links

ECOD PDB View: 2BDE RCSB PDB: 2BDE PDBe: 2BDE UniProt: Q5ZZB6

Downloads

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