ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5gm5B1 - ECOD Domain | ECOD

ECOD/Domains/e5gm5B1

e5gm5B1

UID: 002075092

PDB

Range: B:3-221
PDB: 5GM5 chain B(all domains)
UniProt: P22669 (all domains)

Molecule: Endoglucanase-1

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_12 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyGlyco_hydro_12(10.1.1.15)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (HEPES, Sulfate ion)

HEPESEPE
DrugBank DB16872
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01670Glyco_hydro_12

Glycosyl hydrolase family 12

ClanCL0004Concanavalin

External Links

ECOD PDB View: 5GM5 RCSB PDB: 5GM5 PDBe: 5GM5 UniProt: P22669

Downloads

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